Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs3734534 chr6:26240649 A/G 4.22E-5 289 18.2 26.63 25.82 KM Plot
KIRP rs3736519 chr10:74968564 A/C 1.14E-14 287 26.37 23.63 5.6 KM Plot
KIRP rs373899126 chr21:44302681 GA/G 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs373901750 chr21:44256145 TAA/T 4.45E-6 283 25.58 43.53 11.42 KM Plot
KIRP rs3745115 chr19:22848028 G/C 6.24E-5 276 25.42 25.7 16.53 KM Plot
KIRP rs374734459 chr1:58997390 T/C 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs3751097 chr11:46916693 C/T 0 283 25.6 28.03 9 KM Plot
KIRP rs375182240 chr21:44268584 G/A 0.000167 284 25.57 40.7 13.07 KM Plot
KIRP rs375449897 chr21:37420403 AAGGC/A 8.69E-5 279 26.4 21.9 12.1 KM Plot
KIRP rs3766618 chr1:209895437 G/T 6.06E-5 288 25.53 30.8 17.13 KM Plot
KIRP rs3772816 chr3:124485800 G/A 0.000174 287 26.1 25.7 16.47 KM Plot
KIRP rs3772825 chr3:124497606 G/A 3.86E-5 286 26.1 25.65 16.47 KM Plot
KIRP rs3772826 chr3:124498743 T/C 3.86E-5 286 26.1 25.65 16.47 KM Plot
KIRP rs3772842 chr3:124556418 T/C 7.48E-6 286 26.07 26 16.4 KM Plot
KIRP rs3772844 chr3:124559660 G/A 0.000132 286 26.07 26.38 16.47 KM Plot